CDS

Accession Number TCMCG016C03739
gbkey CDS
Protein Id OMO98708.1
Location complement(join(40933..41094,41941..42156,42751..43242,43338..43373,43722..43799,43883..44127,44212..44245,44896..45070,46165..46286))
Organism Corchorus capsularis
locus_tag CCACVL1_04098

Protein

Length 519aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01007032.1
Definition hypothetical protein CCACVL1_04098 [Corchorus capsularis]
Locus_tag CCACVL1_04098

EGGNOG-MAPPER Annotation

COG_category A
Description cleavage stimulation factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14407        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005847        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042868        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071920        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098787        [VIEW IN EMBL-EBI]
GO:0098789        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGAAGTTTCTGATTTTTGTTTTGTTTCGGTGGTGGCAGTGGGGAATATACCATATGATGCTACTGAGGAACAGCTTATAGAAATCTGCAGGGAGGTTGGCCCTGTTGTTTCTTTCAGACTTGTTATCGATAGAGAAACTGGCAAACCGAAAGGTTATGGGTTCTGTGAATACAAGGATGAGGAGACAGCTTTAAGCGCTCGACGGAATCTTCAAGGTTATGAGATCAATGGCCGGCAATTGCGAGTTGATTTTGCTGAAAATGATAAAGGCTCTGACCGAAATCGAGAACAGGGTCGTGGTGGACCAGGGCTGACAACCAATGTTGACCCTCAAAAACAAGTAGGTGGCCCAGCGGCCCAAGGTGACTCTGCTCACCAACAGCCTATTGGTCTCCATTTAGCTATATCTGCAGCAGCTCTCATGTCTGGAGCTCTTGGTGGCGTACAGGCAGGTCTGCAGCCTAATCAAAATGCTTTGCCAAGTCAGCCAGCACCAGCTAGTGACCCCTTAACATTCCATCTTGCCAAAATGTCAAGGAACCAGCTGAATGAAATTATGTCTGAGCTGAAGAAAATGGCCACACAAAATAAGGAACAAGCTCGTGAGCTATTGCTTGCAAAACCTCAGTTGCTGAAAGCTATATTTCAGGCACAAATAATGCTGGGAATTGTTACTCCACAAGTGTTGCAGATGCCAAACATTCGACAGCCTCAAAGTCAACCAGCACAGATTTCATTACTGGGTGGTCAGCATAATCAGCAGCCAACAGCACAAATGCTTCCTAAGAAAGTTCAGAGTGGCTTGATACCTAAATTGCAAGAAGGTCAAATGTCATCTGTGCTACATAATTCTTTAGCTCACAACCAATTTTCTGCAACCCTACAATCAACAATGCAGCCTCGAATGCAACTTCCACAACATTCTGGCAATCGTGTTTTGCCTCCAGCTTCTGCAAATTCTGTAGTTCCCACACTTCCTCCCATGAACCCCTCTGTTAGACCTCAAATTCAGGTAGCAAGTTCGTTATCTATGAACCAGCAGGTGCAGGTGTCGTTGCCACACTCAGGACAACTTGCAACTGCTAATTTAAGTCAAAGTGCTCGGACGGCTCTGCCACATGCAGTTCTGCAGTCAGCCCCTTTGACTCATCCTCCCATATCAGATTCTGGCCTGCAGCCCGGTCCCTCAAGGACACCAGGCTTTCCAGAAAACTCAAACATGGTTCGGCATCCTTCAGAAGCAGTAAGTCGGCCATTGAAAATGATGAAAGTAGACGGTGCAAGGAGCACTTCTTCCTTACCAGGGGGTCTGAATATGTCCAATGTCAGTGGATCCAGAACATCACTACCTAGAGCAGAAGAGGTGCAATATGCTGAAAAACAGAGTTCTCAGCCTCAGGCTCAGCCTCAGCTTGCACCTGATGTGGAGACCGTCTTACTGCAGCAGGTGCTAAACCTAACACCAGAACAACTTAGTTCATTGCCGCCCGAACAACGTCAACAGGTAATTGAACTCCAAAAGCGACTTCGACAAGATCAGATGCAGCCATCGTAA
Protein:  
MDEVSDFCFVSVVAVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGSDRNREQGRGGPGLTTNVDPQKQVGGPAAQGDSAHQQPIGLHLAISAAALMSGALGGVQAGLQPNQNALPSQPAPASDPLTFHLAKMSRNQLNEIMSELKKMATQNKEQARELLLAKPQLLKAIFQAQIMLGIVTPQVLQMPNIRQPQSQPAQISLLGGQHNQQPTAQMLPKKVQSGLIPKLQEGQMSSVLHNSLAHNQFSATLQSTMQPRMQLPQHSGNRVLPPASANSVVPTLPPMNPSVRPQIQVASSLSMNQQVQVSLPHSGQLATANLSQSARTALPHAVLQSAPLTHPPISDSGLQPGPSRTPGFPENSNMVRHPSEAVSRPLKMMKVDGARSTSSLPGGLNMSNVSGSRTSLPRAEEVQYAEKQSSQPQAQPQLAPDVETVLLQQVLNLTPEQLSSLPPEQRQQVIELQKRLRQDQMQPS